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Homepage of Jingjing Xu , (中文,English) |
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| Master Students Advisor/Senior Engineer | ||||
| Department of Electronic Science, School of Electronic Science and Engineering (National Model Microelectronics College), Xiamen University. | ||||
| Email: jingjing(AT)xmu.edu.cn | ||||
| PhoneCall: 0592-2183301 | ||||
| Computational Sensing Group：Computational Sensing Group at Xiamen University | ||||
| Office location: Room 331, Physics, Electromechanical Aviation Building, Haiyun Campus | ||||
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Biosketch
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Bachelor of Science, Xiamen University, major in Electronic Information Science and Technology, 2005 | ||||||||||
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Doctor of Science, Xiamen University, major in Radio Physics, 2011 | ||||||||||
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New method of network modeling and its application in the field of biomedicine, multi-omics data fusion | ||||||||||
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Literature Retrieval and Writing of Scientific and Technological English Papers (Graduate Course) | ||||||||||
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Administrative Secretary, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance Research | ||||||||||
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"Research on the Mechanism of Intervention of Hepatolenticular Degeneration and Liver Fibrosis by Detoxification, Removing Turbidity and Removing Blood Stasis Based on Metabolomics" Third Prize of Anhui Province Traditional Chinese Medicine Science and Technology Award | ||||||||||
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National Natural Science Foundation of China, General Project, New method of metabolomics based on systems biological network and its application in dwarfism research, 2021-01 to 2024-12, 550,000 yuan, under research, participating (ranked second); | ||||||||||
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Natural Science Foundation of Fujian Province, General Project, New method of network analysis based on metabolic phenotype and its application in the evaluation of acupoint compatibility effect, 2020-05 to 2023-05, 50,000 yuan, under research, presided over; | ||||||||||
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National Natural Science Foundation of China, Youth Project, New method of metabolomics based on network analysis and its application in colorectal cancer research, 2019-01 to 2021-12, 210,000 yuan (direct funding), under research, co-hosted; | ||||||||||
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Natural Science Foundation of Fujian Province, Youth Project, Research on the mechanism of moxibustion at points of the stomach meridian in the treatment of precancerous lesions of chronic atrophic gastritis based on nuclear magnetic resonance metabolomics technology, 2015-04 to 2018-04, 30,000 yuan, completed, host; | ||||||||||
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National Natural Science Foundation of China, General Project, Research on the brain-stomach response mechanism of electroacupuncture at stomach meridian points to repair gastric mucosal injury based on nuclear magnetic resonance metabolomics technology, 2015-01 to 2018-12, 720,000 yuan, completed, cooperation host; | ||||||||||
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Natural Science Foundation of Fujian Province, Social Development Guiding Project, Nuclear Magnetic Resonance Metabolic Profile Analysis New Technology and Its Application in Gestational Diabetes Research, 2015-04 to 2018-03, 150,000 yuan, completed, participated (ranked third ); | ||||||||||
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National Natural Science Foundation of China, General Project, New Method for Fusion and Modeling of Metabolomics Data and Its Application in Diabetic Nephropathy, 2014-01 to 2017-12, 650,000 yuan, completed, participated (ranked third); | ||||||||||
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National Natural Science Foundation of China, Youth Fund, New Method of Metabolite Imaging Based on Magnetic Resonance and Its Application in Living Tissue, 2013-01 to 2015-12, 230,000 yuan, completed, presided over; | ||||||||||
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National Natural Science Foundation of China, general project, NMR-based metabolomics technology to discover biomarkers of pancreatic cancer and its application in early diagnosis, 2013-01 to 2016-12, 700,000 yuan, completed, participated (ranking fourth). | ||||||||||
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[1]Jingjing Xu, Yuanshan Wang, Xiangnan Xu, Kian-Kai Cheng, Daniel Raftery, Jiyang Dong*, NMF-based approach for missing values imputation of mass spectrometry metabolomics data, Molecules, 2021, 26(19): 5787. | ||||||||||
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[2]Wuping Liu, Jingjing Xu, Tao Dai, Guiping Shen, Jianghua Feng*, An integrating strategy for serum metabolomics and microarray analysis to expand the understanding of diet-induced obesity, Analytical Methods, 2021, 13(28): 3127-3135. | ||||||||||
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[3]Lei Guo#, Zhenxing Hu#, Chao Zhao*, Xiangnan Xu, Shujuan Wang, Jingjing Xu, Jiyang Dong, Zongwei Cai*, Data filtering and its proioritization in pipelines for spatial segmentation of mass spectrometry imaging, Analytical chemistry, 2021, 93(11): 4788-4793. | ||||||||||
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[4]Lei Guo, Yongpei Wang, Xiangnan Xu, Kian-Kai Cheng, Yichi Long, Jingjing Xu, Sanshu Li, Jiyang Dong*, DeepPSP: A Global-Local Information-Based Deep Neural Network for the Prediction of Protein Phosphorylation Sites, Journal of Proteome Research, 2021, 20(1): 346-356. | ||||||||||
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[5]Jingjing Xu, Yijia Liu, Xiangnan Xu, Kian-Kai Cheng, Zongbao Yang, Jiyang Dong*, Selection of acupoints combination based on pseudo mutual information maximization, IEEE Access, 2020, 8: 153707-153718. | ||||||||||
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[6] Yueyue Liu, Xiangnan Xu, Lingli Deng, Kian-Kai Cheng, Jingjing XuJingjing Xu, Daniel Raftery, Jiyang Dong*, A novel network modelling for metabolite set analysis: A case study on CRC metabolomics, IEEE Access, 2020, 8: 106425-106436. | ||||||||||
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[7]Yu Bo, Jianghua Feng, Jingjing Xu, Yuqing Huang, Honghao Cai, Xiaohong Cui*, Jiyang Dong*, Shangwu Ding, Zhong Chen, High-resolution pure shift NMR spectroscopy offers better metabolite discrimination in food quality analysis, Food Research International, 2019, 125: 108574. | ||||||||||
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[8]Guiping Shen*, Shenghao Wang, Jiyang Dong, Jianghua Feng, Jingjing Xu, Feng Xia, Xuexi Wang, Jidan Ye*, Metabolic effect of dietary taurine supplementation on Grouper (Epinephelus coiides): A H-1-NMR-based metabolomics study, Molecules, 2019, 24(12): 2253 | ||||||||||
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[9]Xianwei Lin, Xia Liu, Jingjing Xu, Kian-Kai Cheng, Jianan Cao, Tao Liu, Qiong Liu, Huan Zhong, Guiping Shen, Jiyang Dong*, Xiaorong Chang*, Metabolomics analysis of herb-partitioned moxibustion treatment on rats with diarrhea-predominant irritable bowel syndrome, Chinese Medicine, 2019, 14: 18 | ||||||||||
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[10] Jingjing Xu, Xianwei Lin, Kian-Kai Cheng, Huan Zhong, Mi Liu, Guoshan Zhang, Guiping Shen, Jiyang Dong*, Metabolic Response in Rats following Electroacupuncture or Moxibustion Stimulation, Evidence-based Complementary Alternative Medicine, 2019, 6947471. | ||||||||||
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[11]Guiping Shen*, Yin Huang, Jiyang Dong, Xuexi Wang, Kian-Kai Cheng, Jianghua Feng, Jingjing Xu, Jidan Ye*, Metabolic effect of dietary taurine supplementation on Nile Tilapia (Oreochromis nilotictus) evaluated by NMR-based metabolomics, Journal of Agricultural and Food Chemistry, 2018, 66(1): 368-377. | ||||||||||
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[12]Jingjing Xu, Xujuan Zheng, Kian-Kai Cheng, Xiaorong Chang, Guiping Shen, Mi Liu, Yadong Wang, Jiacheng Shen, Qida He, Jiyang Dong*, Zongbao Yang*, NMR-based metabolomics reveals alteration of electro-acupuncture stimulation on chronic atrophic gastritis rats. Scientific Reports, 2017, 7: 45580. | ||||||||||
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[13]Weijun Meng, Xiangnan Xu, Kian-Kai Cheng,Jingjing Xu* , Guiping Shen, Zhidan Wu, Jiyang Dong*, Geographical origin discrimination of Oolong tea (TieGuanYin, Camellia sinensis (L.) O. Kuntze) using proton nuclear magnetic resonance spectroscopy and near-infrared spectroscopy. Food Analytical Method, 2017, 10(11): 3508-3522. | ||||||||||
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[14]Caigui Lin, Zhiliang Wei, Kian-Kai Cheng, Jingjing Xu, Guiping Shen, Chang She, Huan Zhong, Xiaorong Chang*, Jiyang Dong*, 1H NMR-based investigated of metabolic response to electro-acupuncture stimulation. Scientific Reports, 2017, 7: 6820. | ||||||||||
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[15] Wanlan Wang, Kian-Kai Cheng, Lingli Deng,Jingjing Xu , Guiping Shen, Julian L. Griffin, Jiyang Dong*, A clustering-based preprocessing method for the elimination of unwanted residuals in metabolomic data, Metabolomics, 2017, 13(10): 1-11. | ||||||||||
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[16]Jingjing Xu, Huaizhou Jiang, Jinquan Li, Kian-Kai Cheng, Jiyang Dong*, Zhong Chen, 1H NMR-based metabolomics investigation of copper-laden rat: a model of Wilson’s disease, PLoS One, 2015, 10: e0119654 | ||||||||||
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[17]Jingjing Xu, Kian-Kai Cheng, Zongbao Yang*, Chao Wang, Guiping Shen, Yadong Wang, Qiong Liu, Jiyang Dong*, 1H NMR metabolic profiling of biofulids from rats with gastric mucosal lesion and electroacupuncture treatment, Evidence-based Complementary Alternative Medicine, 2015, 801691. | ||||||||||
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[18]Zhishui Li, ChengHong Lin, Jingjing Xu, Huifeng Wu, JingHua Feng*, Heguang Huang. The relations between metabolic variations and genetic evolution of different species. Analytical Biochemistry, 2015, 477: 105-114. | ||||||||||
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[19]Zongbao Yang,Jiacheng Shen ,Yadong Wang ,Caichun Liu ,Jiyang Dong , Jingjing Xu *. Application of 1H NMR metabolomic technique to study the central response mechanism of electroacupuncture in the treatment of gastric ulcer, Chinese Journal of Traditional Chinese Medicine, 2017, 32(7): 3191-3195. | ||||||||||
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[20]Zongbao Yang ,Yadong Wang ,Jiyan Dong ,Qiong Liu ,Chao Wang ,Fuqiang Ma ,Lei Wen , Renfu Quan, Jingjing* Xu . Effects of electroacupuncture on stomach meridian points on the metabolic profile of serum and urine in gastric ulcer model rats Influence, Chinese Journal of Traditional Chinese Medicine, 2016, 31(10): 4180-4183. | ||||||||||
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[21]Renfu Quan *,Huahui Hu ,Xiaolong Huang ,Fei Liu ,Zongbao Yang , Jingjing Xu . Effects of electro-acupuncture at Zhibian and Shuidao points on metabolites in cerebral cortex of rats with acute incomplete spinal cord injury, Traditional Chinese Medicine, 2016, 28(11): 801-806. | ||||||||||
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[22]Huaizhou Jiang *,Jian Wang , Jingjing Xu ,Jiyang Dong . Metabolomics study of liver injury in copper overloaded rats with Wilson disease, Journal of Shanxi Medical University, 2016, 47(3): 199-204. | ||||||||||
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[23]Xiaosha Liu ,Jiyang Dong ,Weijun Meng ,Zhidan Wu , Jingjing Xu *. Dissolution rule and aroma difference of Tieguanyin tea extracts by hydrogen NMR spectroscopy, Chinese Journal of Tea, 2015, 56(4): 198-205 . | ||||||||||
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[24]Huaizhou Jiang *,Jian Wang , Jingjing Xu ,Jiyang Dong . Metabolomics study of Gandouling interfering with kidney injury in copper-loaded rats, Journal of Yunnan University of Traditional Chinese Medicine, 2015, 38(6): 8-12. | ||||||||||
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[25] Jingjing Xu, Changqin Liu, Shuhui Cai, Jiyang Dong*, Xuejun Li, Jianghua Feng and Zhong Chen. Metabolomic profilings of urine and serum from high fat-fed rats via 1H NMR spectroscopy and pattern recognition. Applied Biochemistry and Biotechonology, 2013, 169: 1250-1261 | ||||||||||
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[26]Jingjing Xu, Shuhui Cai, Xuejun Li, Jiyang Dong*, Jun Ding and Zhong Chen. Statistical two-dimensional correlation spectroscopy of urine and serum from metabolomics data. Chemometrics and Intelligent Laboratory Systems, 2012, 112: 33-40 | ||||||||||
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[27]Dong Ouyang, Jingjing Xu, Heguang Huang* and Zhong Chen*. Metabolomic profiling of serum from human pancreatic cancer patients using 1H NMR spectroscopy and principal component analysis. Applied Biochemistry and Biotechnology, 2011, 165:148-154 | ||||||||||
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[28]Jiyang Dong*, Kian-Kai Cheng,Jingjing Xu , Zhong Chen, Jules L. Griffin, Group aggregating normalization method for the preprocessing of NMR-based metabolomic data. Chemometrics and Intelligent Laboratory Systems, 2011, 108:123-132 | ||||||||||
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[29]Jingjing Xu, Shuyu Yang, Shuhui Cai*, Jiyang Dong, Xuejun Li*, Zhong Chen, Identification of biochemical changes in lactovegetarian urine using 1H NMR spectroscopy and pattern recognition, Analytical and Bioanalytical Chemistry, 2010, 396: 1451-1463. | ||||||||||